dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03136
Location and strand information: 93883 - 95253 (+)
Family: 2.A.3.1.3
Protein type: TC
Protein description: Aromatic amino acid transport protein AroP

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03137
Location and strand information: 95411 - 96817 (+)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03138
Location and strand information: 96817 - 97767 (+)
Family: CBM42|GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.1918
Protein molecular weight: 36564.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03139
Location and strand information: 97851 - 98705 (-)
Family: 9.B.125.1.1
Protein type: TC
Protein description: Protein AmpE

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03140
Location and strand information: 98702 - 99265 (-)
Family: null
Protein type: null
Protein description: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03141
Location and strand information: 99353 - 100246 (+)
Family: null
Protein type: null
Protein description: Nicotinate-nucleotide pyrophosphorylase [carboxylating]

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03142
Location and strand information: 100489 - 100926 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03143
Location and strand information: 100936 - 102321 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Type II secretion system protein E

Gene clsuter ID: MGYG000002816_9|CGC2
Gene ID: MGYG000002816_03144
Location and strand information: 102311 - 103513 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Type II secretion system protein F

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002816_03136	Aromatic amino acid transport protein AroP	TC	93883	95253	+	2.A.3.1.3
MGYG000002816_03137	Inner membrane symporter YicJ	TC	95411	96817	+	2.A.2.3.4
MGYG000002816_03138	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	96817	97767	+	CBM42\| GH43\| GH43_26
MGYG000002816_03139	Protein AmpE	TC	97851	98705	-	9.B.125.1.1
MGYG000002816_03140	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	null	98702	99265	-	Amidase_2
MGYG000002816_03141	Nicotinate-nucleotide pyrophosphorylase [carboxylating]	null	99353	100246	+	QRPTase_N\| QRPTase_C
MGYG000002816_03142	hypothetical protein	TC	100489	100926	+	3.A.15.2.1
MGYG000002816_03143	Type II secretion system protein E	TC	100936	102321	+	3.A.15.2.1
MGYG000002816_03144	Type II secretion system protein F	TC	102311	103513	+	3.A.15.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature